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107091b851
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Build branch htrnaseq/main with version main to htrnaseq on branch main (5d5edb7)
Build pipeline: vsh-ci-build-template-j6nf8
Source commit: 5d5edb7888
Source message: Runner: avoid duplicate input paths when publishing results (#76)
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2025-09-23 12:06:25 +00:00 |
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4216c221ee
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Build branch htrnaseq/main with version main to htrnaseq on branch main (03e7939)
Build pipeline: viash-hub.htrnaseq.main-s7m5b
Source commit: 03e7939a9b
Source message: Add integration test for generating a single eset (#73)
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2025-09-10 19:55:10 +00:00 |
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f683dfcf8e
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Build branch htrnaseq/main with version main to htrnaseq on branch main (92755e8)
Build pipeline: viash-hub.htrnaseq.main-666pl
Source commit: 92755e84e7
Source message: Runner: output state and rework publishing (#68)
* add eset output param
* add outputs to publishing and runner
* update publishing
* Update publishing
* Remove debug statements
* Undo change to integration test script
* Add asserts
* Fix asserts and canonicalization of publish paths
* Move fData to folder
* Add CHANGELOG entry [ci skip]
---------
Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com>
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2025-09-02 08:17:05 +00:00 |
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b51996294b
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Build branch main with version main (d70fdf2)
Build pipeline: viash-hub.htrnaseq.main-66qr4
Source commit: d70fdf2a6f
Source message: Fix processing multiple lanes. (#67)
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2025-08-18 11:34:46 +00:00 |
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e24f1ffc55
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Build branch main with version main (60df288)
Build pipeline: viash-hub.htrnaseq.main-7kcqt
Source commit: 60df288f92
Source message: Replace ignore parameter with pools (#66)
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2025-08-05 14:17:29 +00:00 |
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36bd60bf4c
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Build branch main with version main (5a046ba)
Build pipeline: viash-hub.htrnaseq.main-vzhp4
Source commit: 5a046ba003
Source message: Fix detection of FASTQ files with non-alphanumerical sample names. (#65)
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2025-08-01 11:53:04 +00:00 |
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6f76b49468
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Build branch main with version main (10d3b38)
Build pipeline: viash-hub.htrnaseq.main-77sg6
Source commit: 10d3b382d6
Source message: Add runner integration tests, revert ec0dd8b (#64)
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2025-08-01 10:14:18 +00:00 |
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060c9c49a8
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Build branch main with version main (0e87de8)
Build pipeline: viash-hub.htrnaseq.main-29nvl
Source commit: 0e87de80bc
Source message: Bump craftbox to v0.2.0 (#62)
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2025-07-29 11:27:25 +00:00 |
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ef4cabdcee
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Build branch main with version main (a3b7ae3)
Build pipeline: viash-hub.htrnaseq.main-fmznz
Source commit: a3b7ae3f31
Source message: update biobox and craftbox versions (#60)
* update biobox and craftbox versions
* update changelog
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2025-07-25 08:53:08 +00:00 |
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50ef7470fa
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Build branch main with version main (7e47ecc)
Build pipeline: viash-hub.htrnaseq.main-c4nnv
Source commit: 7e47ecc5db
Source message: Update README for 0.8.1 (#57)
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2025-05-16 09:57:56 +00:00 |
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e6f4877f17
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Build branch main with version main (c7c8471)
Build pipeline: viash-hub.htrnaseq.main-dwqr2
Source commit: c7c84719b5
Source message: Update test resources (#47)
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2025-05-14 08:50:22 +00:00 |
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82fb757e19
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Build branch main with version main (d179f82)
Build pipeline: viash-hub.htrnaseq.main-7j6qt
Source commit: d179f82421
Source message: Save input params (#48)
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2025-05-08 14:45:21 +00:00 |
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69b6860b63
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Build branch main with version main (28e59b1)
Build pipeline: viash-hub.htrnaseq.main-6pfd6
Source commit: 28e59b1fb7
Source message: Update readme (#54)
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2025-05-07 10:40:18 +00:00 |
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c87d678e2d
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Build branch main with version main (a62a15e)
Build pipeline: viash-hub.htrnaseq.main-bp4wc
Source commit: a62a15edd2
Source message: Clean CHANGELOG (#53)
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2025-04-30 11:23:27 +00:00 |
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ccd3e04ddc
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Build branch main with version main (a948c26)
Build pipeline: viash-hub.htrnaseq.main-qpqxt
Source commit: a948c26193
Source message: Bump viash to 0.9.4 (#51)
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2025-04-29 13:35:02 +00:00 |
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a95268a2b5
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Build branch main with version main (cb58990)
Build pipeline: viash-hub.htrnaseq.main-mjsqg
Source commit: cb58990a33
Source message: Fix create_report build after R update (#52)
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2025-04-29 12:11:45 +00:00 |
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82d0d471e5
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Build branch main with version main (0cb29cf)
Build pipeline: viash-hub.htrnaseq.main-92wqj
Source commit: 0cb29cf43a
Source message: Keep well demultiplexing output split per sequencing run (#49)
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2025-03-27 13:24:36 +00:00 |
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ee093a387e
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Build branch main with version main (ebb533e)
Build pipeline: viash-hub.htrnaseq.main-kchgg
Source commit: ebb533e982
Source message: Add 'data_processed' subdir to output structure (#45)
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2025-03-20 09:12:44 +00:00 |
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df41c7466c
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Build branch main with version main (8dff52a)
Build pipeline: viash-hub.htrnaseq.main-j2rpn
Source commit: 8dff52a885
Source message: Add `umi_length` parameter to runner. (#46)
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2025-02-28 14:10:10 +00:00 |
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e5a3fd36ee
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Build branch main with version main (bd5b2d4)
Build pipeline: viash-hub.htrnaseq.main-l2658
Source commit: bd5b2d4171
Source message: Keep contents for barcodes with no mapped reads. (#44)
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2025-02-21 11:49:43 +00:00 |
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6468e4a5de
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Build branch main with version main (3c05b79)
Build pipeline: viash-hub.htrnaseq.main-bc45k
Source commit: 3c05b7950b
Source message: Remove duplicate entries from feature data (#41)
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2025-02-17 15:45:09 +00:00 |
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1f84d46798
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Build branch main with version main (a0a780a)
Build pipeline: viash-hub.htrnaseq.main-szxtm
Source commit: a0a780a9c1
Source message: Fix two bugs with missing or empty input data. (#40)
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2025-02-17 08:33:57 +00:00 |
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96e74933b4
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Build branch main with version main (55b0251)
Build pipeline: viash-hub.htrnaseq.main-ddh59
Source commit: 55b025124d
Source message: Add ignore parameter (#39)
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2025-02-14 11:38:08 +00:00 |
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9eac6fff21
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Build branch main with version main (900f5ed)
Build pipeline: viash-hub.htrnaseq.main-2ww7f
Source commit: 900f5ed356
Source message: Runner: allow multiple input directories. (#38)
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2025-02-13 16:08:09 +00:00 |
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34f9a5c19d
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Build branch main with version main (8eb391e)
Build pipeline: viash-hub.htrnaseq.main-xhqqt
Source commit: 8eb391e3eb
Source message: Revert Viash version back to v0.9.0
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2025-01-17 14:36:29 +00:00 |
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