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Build branch fix-integration-tests with version fix-integration-tests (5e3f3231)

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Build pipeline: vsh-ci-dev-9jqlj

Source commit: 5e3f323145

Source message: Fix config error
This commit is contained in:
CI
2024-11-18 10:10:50 +00:00
parent bb7533583f
commit 29ec685ff2
550 changed files with 1544 additions and 1520 deletions
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2
src/workflows/test_workflows/multiomics/process_batches/workflow_test/config.vsh.yaml
View File

@@ -37,3 +37,5 @@ engines:
runners:
- type: executable
- type: nextflow
directives:
label: ["midmem"]

2
src/workflows/test_workflows/multiomics/process_batches/workflow_test2/config.vsh.yaml
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@@ -37,3 +37,5 @@ engines:
runners:
- type: executable
- type: nextflow
directives:
label: ["midmem"]

6
target/executable/annotate/celltypist/.config.vsh.yaml
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@@ -396,9 +396,9 @@ build_info:
output: "target/executable/annotate/celltypist"
executable: "target/executable/annotate/celltypist/celltypist"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/annotate/celltypist/celltypist
View File

@@ -595,9 +595,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik, Weiwei Schultz"
LABEL org.opencontainers.image.description="Companion container for running component annotate celltypist"
LABEL org.opencontainers.image.created="2024-11-15T11:56:04Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:54Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/annotate/onclass/.config.vsh.yaml
View File

@@ -336,9 +336,9 @@ build_info:
output: "target/executable/annotate/onclass"
executable: "target/executable/annotate/onclass/onclass"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/annotate/onclass/onclass
View File

@@ -560,9 +560,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik"
LABEL org.opencontainers.image.description="Companion container for running component annotate onclass"
LABEL org.opencontainers.image.created="2024-11-15T11:56:04Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:55Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/annotate/popv/.config.vsh.yaml
View File

@@ -356,9 +356,9 @@ build_info:
output: "target/executable/annotate/popv"
executable: "target/executable/annotate/popv/popv"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/annotate/popv/popv
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@@ -559,9 +559,9 @@ RUN cd /opt && git clone --depth 1 https://github.com/YosefLab/PopV.git && \
LABEL org.opencontainers.image.authors="Matthias Beyens, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component annotate popv"
LABEL org.opencontainers.image.created="2024-11-15T11:56:03Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:54Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/annotate/random_forest_annotation/.config.vsh.yaml
View File

@@ -357,9 +357,9 @@ build_info:
output: "target/executable/annotate/random_forest_annotation"
executable: "target/executable/annotate/random_forest_annotation/random_forest_annotation"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/annotate/random_forest_annotation/random_forest_annotation
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@@ -575,9 +575,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik"
LABEL org.opencontainers.image.description="Companion container for running component annotate random_forest_annotation"
LABEL org.opencontainers.image.created="2024-11-15T11:56:05Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:55Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/annotate/scanvi/.config.vsh.yaml
View File

@@ -493,9 +493,9 @@ build_info:
output: "target/executable/annotate/scanvi"
executable: "target/executable/annotate/scanvi/scanvi"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/annotate/scanvi/scanvi
View File

@@ -637,9 +637,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik, Weiwei Schultz"
LABEL org.opencontainers.image.description="Companion container for running component annotate scanvi"
LABEL org.opencontainers.image.created="2024-11-15T11:56:04Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:54Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/annotate/svm_annotation/.config.vsh.yaml
View File

@@ -339,9 +339,9 @@ build_info:
output: "target/executable/annotate/svm_annotation"
executable: "target/executable/annotate/svm_annotation/svm_annotation"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/annotate/svm_annotation/svm_annotation
View File

@@ -562,9 +562,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik"
LABEL org.opencontainers.image.description="Companion container for running component annotate svm_annotation"
LABEL org.opencontainers.image.created="2024-11-15T11:56:05Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:56Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/cluster/leiden/.config.vsh.yaml
View File

@@ -250,9 +250,9 @@ build_info:
output: "target/executable/cluster/leiden"
executable: "target/executable/cluster/leiden/leiden"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/cluster/leiden/leiden
View File

@@ -516,9 +516,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries De Maeyer"
LABEL org.opencontainers.image.description="Companion container for running component cluster leiden"
LABEL org.opencontainers.image.created="2024-11-15T11:56:07Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:57Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/compression/compress_h5mu/.config.vsh.yaml
View File

@@ -195,9 +195,9 @@ build_info:
output: "target/executable/compression/compress_h5mu"
executable: "target/executable/compression/compress_h5mu/compress_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/compression/compress_h5mu/compress_h5mu
View File

@@ -479,9 +479,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component compression compress_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:56:00Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:51Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/compression/tar_extract/.config.vsh.yaml
View File

@@ -169,9 +169,9 @@ build_info:
output: "target/executable/compression/tar_extract"
executable: "target/executable/compression/tar_extract/tar_extract"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/compression/tar_extract/tar_extract
View File

@@ -476,9 +476,9 @@ function ViashDockerfile {
FROM ubuntu:latest
ENTRYPOINT []
LABEL org.opencontainers.image.description="Companion container for running component compression tar_extract"
LABEL org.opencontainers.image.created="2024-11-15T11:56:00Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:51Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_10xh5_to_h5mu/.config.vsh.yaml
View File

@@ -301,9 +301,9 @@ build_info:
output: "target/executable/convert/from_10xh5_to_h5mu"
executable: "target/executable/convert/from_10xh5_to_h5mu/from_10xh5_to_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_10xh5_to_h5mu/from_10xh5_to_h5mu
View File

@@ -501,9 +501,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component convert from_10xh5_to_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:55:59Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:50Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_10xmtx_to_h5mu/.config.vsh.yaml
View File

@@ -202,9 +202,9 @@ build_info:
output: "target/executable/convert/from_10xmtx_to_h5mu"
executable: "target/executable/convert/from_10xmtx_to_h5mu/from_10xmtx_to_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_10xmtx_to_h5mu/from_10xmtx_to_h5mu
View File

@@ -479,9 +479,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component convert from_10xmtx_to_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:56:00Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:51Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_bd_to_10x_molecular_barcode_tags/.config.vsh.yaml
View File

@@ -178,9 +178,9 @@ build_info:
output: "target/executable/convert/from_bd_to_10x_molecular_barcode_tags"
executable: "target/executable/convert/from_bd_to_10x_molecular_barcode_tags/from_bd_to_10x_molecular_barcode_tags"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_bd_to_10x_molecular_barcode_tags/from_bd_to_10x_molecular_barcode_tags
View File

@@ -480,9 +480,9 @@ RUN apt-get update && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component convert from_bd_to_10x_molecular_barcode_tags"
LABEL org.opencontainers.image.created="2024-11-15T11:56:00Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:50Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_bdrhap_to_h5mu/.config.vsh.yaml
View File

@@ -211,9 +211,9 @@ build_info:
output: "target/executable/convert/from_bdrhap_to_h5mu"
executable: "target/executable/convert/from_bdrhap_to_h5mu/from_bdrhap_to_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_bdrhap_to_h5mu/from_bdrhap_to_h5mu
View File

@@ -486,9 +486,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dorien Roosen, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component convert from_bdrhap_to_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:56:00Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:50Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_cellranger_multi_to_h5mu/.config.vsh.yaml
View File

@@ -228,9 +228,9 @@ build_info:
output: "target/executable/convert/from_cellranger_multi_to_h5mu"
executable: "target/executable/convert/from_cellranger_multi_to_h5mu/from_cellranger_multi_to_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_cellranger_multi_to_h5mu/from_cellranger_multi_to_h5mu
View File

@@ -503,9 +503,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component convert from_cellranger_multi_to_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:55:58Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:49Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_h5ad_to_h5mu/.config.vsh.yaml
View File

@@ -206,9 +206,9 @@ build_info:
output: "target/executable/convert/from_h5ad_to_h5mu"
executable: "target/executable/convert/from_h5ad_to_h5mu/from_h5ad_to_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_h5ad_to_h5mu/from_h5ad_to_h5mu
View File

@@ -483,9 +483,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries De Maeyer"
LABEL org.opencontainers.image.description="Companion container for running component convert from_h5ad_to_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:55:58Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:48Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_h5mu_to_h5ad/.config.vsh.yaml
View File

@@ -211,9 +211,9 @@ build_info:
output: "target/executable/convert/from_h5mu_to_h5ad"
executable: "target/executable/convert/from_h5mu_to_h5ad/from_h5mu_to_h5ad"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_h5mu_to_h5ad/from_h5mu_to_h5ad
View File

@@ -484,9 +484,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component convert from_h5mu_to_h5ad"
LABEL org.opencontainers.image.created="2024-11-15T11:55:59Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:49Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/from_h5mu_to_seurat/.config.vsh.yaml
View File

@@ -185,9 +185,9 @@ build_info:
output: "target/executable/convert/from_h5mu_to_seurat"
executable: "target/executable/convert/from_h5mu_to_seurat/from_h5mu_to_seurat"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/from_h5mu_to_seurat/from_h5mu_to_seurat
View File

@@ -488,9 +488,9 @@ RUN Rscript -e 'if (!requireNamespace("remotes", quietly = TRUE)) install.packag
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component convert from_h5mu_to_seurat"
LABEL org.opencontainers.image.created="2024-11-15T11:55:59Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:50Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/convert/velocyto_to_h5mu/.config.vsh.yaml
View File

@@ -270,9 +270,9 @@ build_info:
output: "target/executable/convert/velocyto_to_h5mu"
executable: "target/executable/convert/velocyto_to_h5mu/velocyto_to_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/convert/velocyto_to_h5mu/velocyto_to_h5mu
View File

@@ -511,9 +511,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Robrecht Cannoodt, Angela Oliveira Pisco"
LABEL org.opencontainers.image.description="Companion container for running component convert velocyto_to_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:56:06Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:56Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/correction/cellbender_remove_background/.config.vsh.yaml
View File

@@ -606,9 +606,9 @@ build_info:
output: "target/executable/correction/cellbender_remove_background"
executable: "target/executable/correction/cellbender_remove_background/cellbender_remove_background"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/correction/cellbender_remove_background/cellbender_remove_background
View File

@@ -742,9 +742,9 @@ RUN pip install --upgrade pip && \
pip install --upgrade --no-cache-dir "lxml~=4.8.0" "mudata~=0.2.1" "cellbender~=0.3.0"
LABEL org.opencontainers.image.description="Companion container for running component correction cellbender_remove_background"
LABEL org.opencontainers.image.created="2024-11-15T11:55:54Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:45Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/correction/cellbender_remove_background_v0_2/.config.vsh.yaml
View File

@@ -402,9 +402,9 @@ build_info:
output: "target/executable/correction/cellbender_remove_background_v0_2"
executable: "target/executable/correction/cellbender_remove_background_v0_2/cellbender_remove_background_v0_2"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/correction/cellbender_remove_background_v0_2/cellbender_remove_background_v0_2
View File

@@ -608,9 +608,9 @@ RUN pip install --upgrade pip && \
pip install --upgrade --no-cache-dir "anndata==0.10.8" "mudata~=0.2.4" "pandas!=2.1.2" "numpy<2.0.0" "muon==0.1.5" "cellbender==0.2.1"
LABEL org.opencontainers.image.description="Companion container for running component correction cellbender_remove_background_v0_2"
LABEL org.opencontainers.image.created="2024-11-15T11:55:54Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:44Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dataflow/concatenate_h5mu/.config.vsh.yaml
View File

@@ -275,9 +275,9 @@ build_info:
output: "target/executable/dataflow/concatenate_h5mu"
executable: "target/executable/dataflow/concatenate_h5mu/concatenate_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dataflow/concatenate_h5mu/concatenate_h5mu
View File

@@ -525,9 +525,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component dataflow concatenate_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:55:56Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:47Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dataflow/merge/.config.vsh.yaml
View File

@@ -203,9 +203,9 @@ build_info:
output: "target/executable/dataflow/merge"
executable: "target/executable/dataflow/merge/merge"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dataflow/merge/merge
View File

@@ -480,9 +480,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component dataflow merge"
LABEL org.opencontainers.image.created="2024-11-15T11:55:55Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:46Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dataflow/split_h5mu/.config.vsh.yaml
View File

@@ -237,9 +237,9 @@ build_info:
output: "target/executable/dataflow/split_h5mu"
executable: "target/executable/dataflow/split_h5mu/split_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dataflow/split_h5mu/split_h5mu
View File

@@ -506,9 +506,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dorien Roosen"
LABEL org.opencontainers.image.description="Companion container for running component dataflow split_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:55:56Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:47Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dataflow/split_h5mu_train_test/.config.vsh.yaml
View File

@@ -278,9 +278,9 @@ build_info:
output: "target/executable/dataflow/split_h5mu_train_test"
executable: "target/executable/dataflow/split_h5mu_train_test/split_h5mu_train_test"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dataflow/split_h5mu_train_test/split_h5mu_train_test
View File

@@ -530,9 +530,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik"
LABEL org.opencontainers.image.description="Companion container for running component dataflow split_h5mu_train_test"
LABEL org.opencontainers.image.created="2024-11-15T11:55:56Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:46Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dataflow/split_modalities/.config.vsh.yaml
View File

@@ -228,9 +228,9 @@ build_info:
output: "target/executable/dataflow/split_modalities"
executable: "target/executable/dataflow/split_modalities/split_modalities"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dataflow/split_modalities/split_modalities
View File

@@ -487,9 +487,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component dataflow split_modalities"
LABEL org.opencontainers.image.created="2024-11-15T11:55:57Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:47Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/demux/bcl2fastq/.config.vsh.yaml
View File

@@ -192,9 +192,9 @@ build_info:
output: "target/executable/demux/bcl2fastq"
executable: "target/executable/demux/bcl2fastq/bcl2fastq"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/demux/bcl2fastq/bcl2fastq
View File

@@ -484,9 +484,9 @@ RUN apt-get update && \
LABEL org.opencontainers.image.authors="Toni Verbeiren"
LABEL org.opencontainers.image.description="Companion container for running component demux bcl2fastq"
LABEL org.opencontainers.image.created="2024-11-15T11:56:14Z"
LABEL org.opencontainers.image.created="2024-11-18T09:23:05Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/demux/bcl_convert/.config.vsh.yaml
View File

@@ -267,9 +267,9 @@ build_info:
output: "target/executable/demux/bcl_convert"
executable: "target/executable/demux/bcl_convert/bcl_convert"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/demux/bcl_convert/bcl_convert
View File

@@ -510,9 +510,9 @@ RUN apt-get update && \
LABEL org.opencontainers.image.authors="Toni Verbeiren, Marijke Van Moerbeke, Weiwei Schultz, Dorien Roosen"
LABEL org.opencontainers.image.description="Companion container for running component demux bcl_convert"
LABEL org.opencontainers.image.created="2024-11-15T11:56:15Z"
LABEL org.opencontainers.image.created="2024-11-18T09:23:05Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/demux/cellranger_atac_mkfastq/.config.vsh.yaml
View File

@@ -236,9 +236,9 @@ build_info:
output: "target/executable/demux/cellranger_atac_mkfastq"
executable: "target/executable/demux/cellranger_atac_mkfastq/cellranger_atac_mkfastq"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/demux/cellranger_atac_mkfastq/cellranger_atac_mkfastq
View File

@@ -513,9 +513,9 @@ RUN DEBIAN_FRONTEND=noninteractive apt update \
LABEL org.opencontainers.image.authors="Vladimir Shitov"
LABEL org.opencontainers.image.description="Companion container for running component demux cellranger_atac_mkfastq"
LABEL org.opencontainers.image.created="2024-11-15T11:56:15Z"
LABEL org.opencontainers.image.created="2024-11-18T09:23:06Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/demux/cellranger_mkfastq/.config.vsh.yaml
View File

@@ -227,9 +227,9 @@ build_info:
output: "target/executable/demux/cellranger_mkfastq"
executable: "target/executable/demux/cellranger_mkfastq/cellranger_mkfastq"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/demux/cellranger_mkfastq/cellranger_mkfastq
View File

@@ -489,9 +489,9 @@ apt upgrade -y && apt install -y procps && rm -rf /var/lib/apt/lists/*
LABEL org.opencontainers.image.authors="Angela Oliveira Pisco, Samuel D'Souza, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component demux cellranger_mkfastq"
LABEL org.opencontainers.image.created="2024-11-15T11:56:15Z"
LABEL org.opencontainers.image.created="2024-11-18T09:23:06Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dimred/densmap/.config.vsh.yaml
View File

@@ -404,9 +404,9 @@ build_info:
output: "target/executable/dimred/densmap"
executable: "target/executable/dimred/densmap/densmap"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dimred/densmap/densmap
View File

@@ -614,9 +614,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik"
LABEL org.opencontainers.image.description="Companion container for running component dimred densmap"
LABEL org.opencontainers.image.created="2024-11-15T11:55:58Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:49Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dimred/lsi/.config.vsh.yaml
View File

@@ -308,9 +308,9 @@ build_info:
output: "target/executable/dimred/lsi"
executable: "target/executable/dimred/lsi/lsi"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dimred/lsi/lsi
View File

@@ -529,9 +529,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Sarah Ouologuem, Vladimir Shitov"
LABEL org.opencontainers.image.description="Companion container for running component dimred lsi"
LABEL org.opencontainers.image.created="2024-11-15T11:56:00Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:50Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dimred/pca/.config.vsh.yaml
View File

@@ -267,9 +267,9 @@ build_info:
output: "target/executable/dimred/pca"
executable: "target/executable/dimred/pca/pca"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dimred/pca/pca
View File

@@ -521,9 +521,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries De Maeyer"
LABEL org.opencontainers.image.description="Companion container for running component dimred pca"
LABEL org.opencontainers.image.created="2024-11-15T11:55:59Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:50Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dimred/tsne/.config.vsh.yaml
View File

@@ -316,9 +316,9 @@ build_info:
output: "target/executable/dimred/tsne"
executable: "target/executable/dimred/tsne/tsne"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dimred/tsne/tsne
View File

@@ -547,9 +547,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Jakub Majercik"
LABEL org.opencontainers.image.description="Companion container for running component dimred tsne"
LABEL org.opencontainers.image.created="2024-11-15T11:55:59Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:49Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/dimred/umap/.config.vsh.yaml
View File

@@ -321,9 +321,9 @@ build_info:
output: "target/executable/dimred/umap"
executable: "target/executable/dimred/umap/umap"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/dimred/umap/umap
View File

@@ -558,9 +558,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries De Maeyer"
LABEL org.opencontainers.image.description="Companion container for running component dimred umap"
LABEL org.opencontainers.image.created="2024-11-15T11:55:59Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:50Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/download/download_file/.config.vsh.yaml
View File

@@ -158,9 +158,9 @@ build_info:
output: "target/executable/download/download_file"
executable: "target/executable/download/download_file/download_file"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/download/download_file/download_file
View File

@@ -479,9 +479,9 @@ FROM bash:5.1.16
ENTRYPOINT []
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component download download_file"
LABEL org.opencontainers.image.created="2024-11-15T11:56:07Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:57Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/download/sync_test_resources/.config.vsh.yaml
View File

@@ -194,9 +194,9 @@ build_info:
output: "target/executable/download/sync_test_resources"
executable: "target/executable/download/sync_test_resources/sync_test_resources"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/download/sync_test_resources/sync_test_resources
View File

@@ -499,9 +499,9 @@ RUN wget https://github.com/mikefarah/yq/releases/latest/download/yq_linux_amd64
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component download sync_test_resources"
LABEL org.opencontainers.image.created="2024-11-15T11:56:06Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:57Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/feature_annotation/highly_variable_features_scanpy/.config.vsh.yaml
View File

@@ -356,9 +356,9 @@ build_info:
output: "target/executable/feature_annotation/highly_variable_features_scanpy"
executable: "target/executable/feature_annotation/highly_variable_features_scanpy/highly_variable_features_scanpy"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/feature_annotation/highly_variable_features_scanpy/highly_variable_features_scanpy
View File

@@ -580,9 +580,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries De Maeyer, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component feature_annotation highly_variable_features_scanpy"
LABEL org.opencontainers.image.created="2024-11-15T11:55:54Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:44Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/feature_annotation/score_genes_cell_cycle_scanpy/.config.vsh.yaml
View File

@@ -393,9 +393,9 @@ build_info:
output: "target/executable/feature_annotation/score_genes_cell_cycle_scanpy"
executable: "target/executable/feature_annotation/score_genes_cell_cycle_scanpy/score_genes_cell_cycle_scanpy"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/feature_annotation/score_genes_cell_cycle_scanpy/score_genes_cell_cycle_scanpy
View File

@@ -580,9 +580,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Robrecht Cannoodt, Dorien Roosen, Weiwei Schultz"
LABEL org.opencontainers.image.description="Companion container for running component feature_annotation score_genes_cell_cycle_scanpy"
LABEL org.opencontainers.image.created="2024-11-15T11:55:54Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:45Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/feature_annotation/score_genes_scanpy/.config.vsh.yaml
View File

@@ -282,9 +282,9 @@ build_info:
output: "target/executable/feature_annotation/score_genes_scanpy"
executable: "target/executable/feature_annotation/score_genes_scanpy/score_genes_scanpy"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/feature_annotation/score_genes_scanpy/score_genes_scanpy
View File

@@ -551,9 +551,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Robrecht Cannoodt, Dorien Roosen, Weiwei Schultz"
LABEL org.opencontainers.image.description="Companion container for running component feature_annotation score_genes_scanpy"
LABEL org.opencontainers.image.created="2024-11-15T11:55:53Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:44Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/files/make_params/.config.vsh.yaml
View File

@@ -235,9 +235,9 @@ build_info:
output: "target/executable/files/make_params"
executable: "target/executable/files/make_params/make_params"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/files/make_params/make_params
View File

@@ -499,9 +499,9 @@ FROM ghcr.io/data-intuitive/randpy:r4.0
ENTRYPOINT []
LABEL org.opencontainers.image.authors="Angela Oliveira Pisco, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component files make_params"
LABEL org.opencontainers.image.created="2024-11-15T11:56:03Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:53Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/delimit_fraction/.config.vsh.yaml
View File

@@ -263,9 +263,9 @@ build_info:
output: "target/executable/filter/delimit_fraction"
executable: "target/executable/filter/delimit_fraction/delimit_fraction"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/delimit_fraction/delimit_fraction
View File

@@ -516,9 +516,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component filter delimit_fraction"
LABEL org.opencontainers.image.created="2024-11-15T11:56:03Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:53Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/do_filter/.config.vsh.yaml
View File

@@ -220,9 +220,9 @@ build_info:
output: "target/executable/filter/do_filter"
executable: "target/executable/filter/do_filter/do_filter"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/do_filter/do_filter
View File

@@ -494,9 +494,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component filter do_filter"
LABEL org.opencontainers.image.created="2024-11-15T11:56:02Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:52Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/filter_with_counts/.config.vsh.yaml
View File

@@ -305,9 +305,9 @@ build_info:
output: "target/executable/filter/filter_with_counts"
executable: "target/executable/filter/filter_with_counts/filter_with_counts"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/filter_with_counts/filter_with_counts
View File

@@ -534,9 +534,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries De Maeyer, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component filter filter_with_counts"
LABEL org.opencontainers.image.created="2024-11-15T11:56:02Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:53Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/filter_with_scrublet/.config.vsh.yaml
View File

@@ -325,9 +325,9 @@ build_info:
output: "target/executable/filter/filter_with_scrublet"
executable: "target/executable/filter/filter_with_scrublet/filter_with_scrublet"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/filter_with_scrublet/filter_with_scrublet
View File

@@ -560,9 +560,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries De Maeyer, Robrecht Cannoodt"
LABEL org.opencontainers.image.description="Companion container for running component filter filter_with_scrublet"
LABEL org.opencontainers.image.created="2024-11-15T11:56:00Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:51Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/intersect_obs/.config.vsh.yaml
View File

@@ -210,9 +210,9 @@ build_info:
output: "target/executable/filter/intersect_obs"
executable: "target/executable/filter/intersect_obs/intersect_obs"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/intersect_obs/intersect_obs
View File

@@ -487,9 +487,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont, Isabelle Bergiers"
LABEL org.opencontainers.image.description="Companion container for running component filter intersect_obs"
LABEL org.opencontainers.image.created="2024-11-15T11:56:02Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:53Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/remove_modality/.config.vsh.yaml
View File

@@ -192,9 +192,9 @@ build_info:
output: "target/executable/filter/remove_modality"
executable: "target/executable/filter/remove_modality/remove_modality"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/remove_modality/remove_modality
View File

@@ -483,9 +483,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component filter remove_modality"
LABEL org.opencontainers.image.created="2024-11-15T11:56:01Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:52Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/subset_h5mu/.config.vsh.yaml
View File

@@ -206,9 +206,9 @@ build_info:
output: "target/executable/filter/subset_h5mu"
executable: "target/executable/filter/subset_h5mu/subset_h5mu"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/subset_h5mu/subset_h5mu
View File

@@ -489,9 +489,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dries Schaumont"
LABEL org.opencontainers.image.description="Companion container for running component filter subset_h5mu"
LABEL org.opencontainers.image.created="2024-11-15T11:56:01Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:51Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/filter/subset_obsp/.config.vsh.yaml
View File

@@ -240,9 +240,9 @@ build_info:
output: "target/executable/filter/subset_obsp"
executable: "target/executable/filter/subset_obsp/subset_obsp"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/filter/subset_obsp/subset_obsp
View File

@@ -503,9 +503,9 @@ RUN pip install --upgrade pip && \
LABEL org.opencontainers.image.authors="Dorien Roosen"
LABEL org.opencontainers.image.description="Companion container for running component filter subset_obsp"
LABEL org.opencontainers.image.created="2024-11-15T11:56:01Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:52Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

6
target/executable/genetic_demux/bcftools/.config.vsh.yaml
View File

@@ -194,9 +194,9 @@ build_info:
output: "target/executable/genetic_demux/bcftools"
executable: "target/executable/genetic_demux/bcftools/bcftools"
viash_version: "0.9.0"
git_commit: "da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
git_remote: "https://x-access-token:ghs_WgbTvvspBKMSQ5BPucz45vMfHrxqK54Vys9e@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1939-gda62b4ff"
git_commit: "5e3f3231456facaf14da57fa563d4de58492ca82"
git_remote: "https://x-access-token:ghs_EujrUcz58S6J44CLSvromEPEcaMxTc30MU1j@github.com/openpipelines-bio/openpipeline"
git_tag: "0.2.0-1942-g5e3f3231"
package_config:
name: "openpipeline"
version: "fix-integration-tests"

4
target/executable/genetic_demux/bcftools/bcftools
View File

@@ -485,9 +485,9 @@ RUN apt-get update && \
RUN wget https://github.com/samtools/bcftools/releases/download/1.16/bcftools-1.16.tar.bz2 -O bcftools.tar.bz2 && tar -xjvf bcftools.tar.bz2 && cd bcftools-1.16 && make prefix=/usr/local install
LABEL org.opencontainers.image.authors="Xichen Wu"
LABEL org.opencontainers.image.description="Companion container for running component genetic_demux bcftools"
LABEL org.opencontainers.image.created="2024-11-15T11:56:04Z"
LABEL org.opencontainers.image.created="2024-11-18T09:22:54Z"
LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline"
LABEL org.opencontainers.image.revision="da62b4ffe30b6ef36fcb7ef5944f29d45d1138ff"
LABEL org.opencontainers.image.revision="5e3f3231456facaf14da57fa563d4de58492ca82"
LABEL org.opencontainers.image.version="fix-integration-tests"
VIASHDOCKER

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