Build branch v0.1 with version v0.1 (420b610)
Build pipeline: openpipelines-bio.openpipeline-spatial.v0.1-rwpq2
Source commit: 420b610b04
Source message: Merge pull request #18 from openpipelines-bio/update-op-dependencies
Update OP dependency version
This commit is contained in:
@@ -1,6 +1,6 @@
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name: "from_xenium_to_h5mu"
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namespace: "convert"
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version: "v0.1.0"
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version: "v0.1"
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authors:
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- name: "Dorien Roosen"
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roles:
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@@ -198,7 +198,7 @@ engines:
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id: "docker"
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image: "python:3.12-slim"
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target_registry: "images.viash-hub.com"
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target_tag: "v0.1.0"
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target_tag: "v0.1"
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namespace_separator: "/"
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setup:
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- type: "apt"
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@@ -233,11 +233,11 @@ build_info:
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output: "target/executable/convert/from_xenium_to_h5mu"
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executable: "target/executable/convert/from_xenium_to_h5mu/from_xenium_to_h5mu"
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viash_version: "0.9.4"
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git_commit: "963107088819638e9e15d4f413c0a763dc81a192"
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git_commit: "420b610b045c138f07475a1af39529f233d9af5a"
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git_remote: "https://github.com/openpipelines-bio/openpipeline_spatial"
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package_config:
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name: "openpipeline_spatial"
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version: "v0.1.0"
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version: "v0.1"
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info:
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test_resources:
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- type: "s3"
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@@ -257,7 +257,7 @@ package_config:
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)'"
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- ".engines += { type: \"native\" }"
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- ".engines[.type == 'docker'].target_registry := 'images.viash-hub.com'"
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- ".engines[.type == 'docker'].target_tag := 'v0.1.0'"
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- ".engines[.type == 'docker'].target_tag := 'v0.1'"
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organization: "vsh"
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links:
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repository: "https://github.com/openpipelines-bio/openpipeline_spatial"
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@@ -1,6 +1,6 @@
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#!/usr/bin/env bash
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# from_xenium_to_h5mu v0.1.0
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# from_xenium_to_h5mu v0.1
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#
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# This wrapper script is auto-generated by viash 0.9.4 and is thus a derivative
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# work thereof. This software comes with ABSOLUTELY NO WARRANTY from Data
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@@ -458,10 +458,10 @@ RUN pip install --upgrade pip && \
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LABEL org.opencontainers.image.authors="Dorien Roosen"
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LABEL org.opencontainers.image.description="Companion container for running component convert from_xenium_to_h5mu"
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LABEL org.opencontainers.image.created="2025-08-25T08:17:05Z"
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LABEL org.opencontainers.image.created="2025-08-25T11:47:09Z"
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LABEL org.opencontainers.image.source="https://github.com/openpipelines-bio/openpipeline_spatial"
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LABEL org.opencontainers.image.revision="963107088819638e9e15d4f413c0a763dc81a192"
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LABEL org.opencontainers.image.version="v0.1.0"
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LABEL org.opencontainers.image.revision="420b610b045c138f07475a1af39529f233d9af5a"
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LABEL org.opencontainers.image.version="v0.1"
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VIASHDOCKER
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fi
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@@ -578,7 +578,7 @@ VIASH_DOCKER_RUN_ARGS=(-i --rm)
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# ViashHelp: Display helpful explanation about this executable
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function ViashHelp {
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echo "from_xenium_to_h5mu v0.1.0"
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echo "from_xenium_to_h5mu v0.1"
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echo ""
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echo "Converts the output from Xenium to a single .h5mu file, where the count matrix"
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echo "is written to the \`rna\` modality."
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@@ -670,7 +670,7 @@ while [[ $# -gt 0 ]]; do
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shift 1
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;;
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--version)
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echo "from_xenium_to_h5mu v0.1.0"
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echo "from_xenium_to_h5mu v0.1"
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exit
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;;
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--input)
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@@ -839,7 +839,7 @@ if [[ "$VIASH_ENGINE_TYPE" == "docker" ]]; then
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# determine docker image id
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if [[ "$VIASH_ENGINE_ID" == 'docker' ]]; then
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VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/openpipeline_spatial/convert/from_xenium_to_h5mu:v0.1.0'
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VIASH_DOCKER_IMAGE_ID='images.viash-hub.com/vsh/openpipeline_spatial/convert/from_xenium_to_h5mu:v0.1'
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fi
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# print dockerfile
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