Files
openpipeline_spatial/resources_test_scripts/reference_tiny.sh
CI c6296af264 Build branch openpipeline_spatial/h5mu-to-seurat with version h5mu-to-seurat to openpipeline_spatial on branch h5mu-to-seurat (3b5314b)
Build pipeline: test-vsh-ci-build-template-qlrkg

Source commit: 3b5314b60d

Source message: update changelog
2025-10-20 09:17:46 +00:00

19 lines
383 B
Bash
Executable File

#!/bin/bash
set -eo pipefail
# get the root of the directory
REPO_ROOT=$(git rev-parse --show-toplevel)
# ensure that the command below is run from the root of the repository
cd "$REPO_ROOT"
DIR="resources_test/GRCh38"
mkdir -p $DIR
aws s3 sync \
--profile di \
s3://openpipelines-bio/openpipeline_spatial/resources_test/GRCh38 \
"$DIR" \
--delete \
--dryrun