Commit Graph

12 Commits

Author SHA1 Message Date
CI
4216c221ee Build branch htrnaseq/main with version main to htrnaseq on branch main (03e7939)
Build pipeline: viash-hub.htrnaseq.main-s7m5b

Source commit: 03e7939a9b

Source message: Add integration test for generating a single eset (#73)
2025-09-10 19:55:10 +00:00
CI
8a9db1b415 Build branch htrnaseq/main with version main to htrnaseq on branch main (92755e8)
Build pipeline: viash-hub.htrnaseq.main-srl6j

Source commit: 92755e84e7

Source message: Runner: output state and rework publishing (#68)

* add eset output param

* add outputs to publishing and runner

* update publishing

* Update publishing

* Remove debug statements

* Undo change to integration test script

* Add asserts

* Fix asserts and canonicalization of publish paths

* Move fData to folder

* Add CHANGELOG entry [ci skip]

---------

Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com>
2025-09-02 14:03:52 +00:00
CI
f683dfcf8e Build branch htrnaseq/main with version main to htrnaseq on branch main (92755e8)
Build pipeline: viash-hub.htrnaseq.main-666pl

Source commit: 92755e84e7

Source message: Runner: output state and rework publishing (#68)

* add eset output param

* add outputs to publishing and runner

* update publishing

* Update publishing

* Remove debug statements

* Undo change to integration test script

* Add asserts

* Fix asserts and canonicalization of publish paths

* Move fData to folder

* Add CHANGELOG entry [ci skip]

---------

Co-authored-by: Dries Schaumont <5946712+DriesSchaumont@users.noreply.github.com>
2025-09-02 08:17:05 +00:00
CI
b51996294b Build branch main with version main (d70fdf2)
Build pipeline: viash-hub.htrnaseq.main-66qr4

Source commit: d70fdf2a6f

Source message: Fix processing multiple lanes. (#67)
2025-08-18 11:34:46 +00:00
CI
e24f1ffc55 Build branch main with version main (60df288)
Build pipeline: viash-hub.htrnaseq.main-7kcqt

Source commit: 60df288f92

Source message: Replace ignore parameter with pools (#66)
2025-08-05 14:17:29 +00:00
CI
36bd60bf4c Build branch main with version main (5a046ba)
Build pipeline: viash-hub.htrnaseq.main-vzhp4

Source commit: 5a046ba003

Source message: Fix detection of FASTQ files with non-alphanumerical sample names. (#65)
2025-08-01 11:53:04 +00:00
CI
6f76b49468 Build branch main with version main (10d3b38)
Build pipeline: viash-hub.htrnaseq.main-77sg6

Source commit: 10d3b382d6

Source message: Add runner integration tests, revert ec0dd8b (#64)
2025-08-01 10:14:18 +00:00
CI
060c9c49a8 Build branch main with version main (0e87de8)
Build pipeline: viash-hub.htrnaseq.main-29nvl

Source commit: 0e87de80bc

Source message: Bump craftbox to v0.2.0 (#62)
2025-07-29 11:27:25 +00:00
CI
ef4cabdcee Build branch main with version main (a3b7ae3)
Build pipeline: viash-hub.htrnaseq.main-fmznz

Source commit: a3b7ae3f31

Source message: update biobox and craftbox versions (#60)

* update biobox and craftbox versions

* update changelog
2025-07-25 08:53:08 +00:00
CI
50ef7470fa Build branch main with version main (7e47ecc)
Build pipeline: viash-hub.htrnaseq.main-c4nnv

Source commit: 7e47ecc5db

Source message: Update README for 0.8.1 (#57)
2025-05-16 09:57:56 +00:00
CI
e6f4877f17 Build branch main with version main (c7c8471)
Build pipeline: viash-hub.htrnaseq.main-dwqr2

Source commit: c7c84719b5

Source message: Update test resources (#47)
2025-05-14 08:50:22 +00:00
CI
82fb757e19 Build branch main with version main (d179f82)
Build pipeline: viash-hub.htrnaseq.main-7j6qt

Source commit: d179f82421

Source message: Save input params (#48)
2025-05-08 14:45:21 +00:00